STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61890.1PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: tba:TERMP_01052 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
AEJ61891.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: sta:STHERM_c15780 DNA polymerase, beta domain-containing protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region.
 
  
 0.955
AEJ61856.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: sta:STHERM_c15520 hypothetical protein; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region.
 
  
 0.799
AEJ61454.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: rrs:RoseRS_0844 DNA polymerase subunit beta; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region.
 
  
 0.786
AEJ61892.1
PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR010206:IPR002646; KEGG: sta:STHERM_c15790 polyA polymerase family protein; PFAM: Polynucleotide adenylyltransferase region; SPTR: Poly(A) polymerase; TIGRFAM: Poly(A) polymerase, PcnB.
       0.550
AEJ61889.1
KEGG: sta:STHERM_c15770 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.460
AEJ61857.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: sta:STHERM_c15530 nucleotidyltransferase; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
  
  
 
0.445
AEJ61455.1
PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: fra:Francci3_1884 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein.
  
  
 
0.422
AEJ61888.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: tth:TTC0275 undecaprenyl-phosphate galactosephosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
       0.405
hisS
PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: sta:STHERM_c15800 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup.
       0.402
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.