STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ61917.1Glycoside hydrolase family 13 domain protein; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro IPR004193; KEGG: sta:STHERM_c15960 hypothetical protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Glycoside hydrolase family 13 domain protein. (674 aa)    
Predicted Functional Partners:
AEJ61063.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: sta:STHERM_c14440 hypothetical protein; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Alpha-glucan phosphorylase.
  
 
 0.924
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.921
AEJ61674.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005835:IPR001451; KEGG: sta:STHERM_c07550 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; SPTR: Glucose-1-phosphate adenylyltransferase.
  
  
 0.921
AEJ61916.1
KEGG: sta:STHERM_c15950 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.727
AEJ60615.1
KEGG: sta:STHERM_c03610 hypothetical protein; SPTR: CheC-like family protein.
  
    0.714
AEJ61756.1
KEGG: sta:STHERM_c13570 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.676
AEJ60427.1
KEGG: sta:STHERM_c01520 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.661
AEJ60429.1
KEGG: sta:STHERM_c01540 BNR domain-containing protein; SPTR: BNR domain-containing protein.
  
     0.648
AEJ60964.1
PFAM: Late competence development protein ComFB; InterPro IPR019657; KEGG: sta:STHERM_c06700 hypothetical protein; PFAM: Late competence development protein ComFB; SPTR: Late competence development protein ComFB.
  
     0.620
AEJ60686.1
PFAM: Tetratricopeptide repeat; Protein of unknown function (DUF1570); InterPro IPR019734:IPR013105:IPR001440; KEGG: sta:STHERM_c04360 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_1 repeat-containing protein.
  
     0.597
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.