STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62060.1Regulatory protein MarR; PFAM: ROK family; MarR family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000835:IPR000600; KEGG: sta:STHERM_c17300 transcriptional repressor; PFAM: HTH transcriptional regulator, MarR; ROK; SPTR: Regulatory protein MarR. (407 aa)    
Predicted Functional Partners:
AEJ62061.1
KEGG: sta:STHERM_c17310 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
AEJ62059.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: sta:STHERM_c17290 oligopeptide ABC transporter periplasmic oligopeptide-binding protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5.
       0.519
AEJ60593.1
Transporter; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein; COGs: COG4213 ABC-type xylose transport system periplasmic component; KEGG: sta:STHERM_c03240 transporter; SPTR: D-xylose ABC transporter (Substrate-binding protein).
 
     0.517
AEJ60529.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sta:STHERM_c02610 sugar ABC transporter sugar-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1.
 
    0.427
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.