STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62067.1PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR011782:IPR001478:IPR001254; KEGG: sta:STHERM_c17370 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Protease Do; TIGRFAM: Peptidase S1C, Do. (504 aa)    
Predicted Functional Partners:
AEJ62411.1
Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: sta:STHERM_c21110 hypothetical protein; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Peptidase S1 and S6 chymotrypsin/Hap.
  
     0.587
AEJ62068.1
Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: sta:STHERM_c17380 heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Putative heat shock protein.
   
 
 0.562
AEJ62069.1
Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: sta:STHERM_c17390 heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Putative heat shock protein.
   
 
 0.528
AEJ61247.1
PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: sta:STHERM_c09480 ankyrin repeat-containing protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Ankyrin.
  
 0.416
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.