STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62328.1Transposase IS4 family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR002559; KEGG: sta:STHERM_c20700 transposase of ISLsa3, OrfB; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein. (440 aa)    
Predicted Functional Partners:
AEJ62326.1
RCC1 repeats protein; COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; KEGG: sta:STHERM_c20190 RCC1 repeats protein; SPTR: Regulator of chromosome condensation RCC1.
 
     0.426
AEJ62329.1
Appr-1-p processing domain protein; PFAM: Macro domain; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: sta:STHERM_c20310 hypothetical protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Appr-1-p processing domain protein.
       0.402
AEJ62327.1
MULE transposase, conserved domain-containing protein; Required for the transposition of the insertion element.
       0.401
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.