STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62334.1PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: sta:STHERM_c20360 PASTA domain-containing protein; PFAM: PASTA; SMART: PASTA; SPTR: PASTA domain containing protein. (343 aa)    
Predicted Functional Partners:
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
    0.822
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.811
AEJ60892.1
Peptidase C11 clostripain; PFAM: Clostripain family; TIGRFAM: clostripain; InterPro IPR005077; KEGG: peptidase C11 clostripain; PFAM: Peptidase C11, clostripain; SPTR: Peptidase C11 clostripain.
   
 
 0.693
AEJ61719.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: sta:STHERM_c06980 hypothetical protein; PFAM: Forkhead-associated; SPTR: Forkhead-associated protein.
   
 
 0.693
AEJ61724.1
PFAM: FHA domain; COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: sta:STHERM_c06930 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; SPTR: FHA domain containing protein.
   
 
 0.693
AEJ60625.1
KEGG: sta:STHERM_c03720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.637
AEJ61720.1
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635:IPR002290:IPR017442; KEGG: sta:STHERM_c06970 serine/threonine-protein kinase Sps1; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Serine/threonine protein kinase.
 
 
 0.624
AEJ61196.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
  
 0.621
AEJ61215.1
PFAM: Flagellar hook-length control protein FliK; InterPro IPR001635; KEGG: sta:STHERM_c09160 hypothetical protein; PFAM: Flagellar hook-length control protein; SPTR: Flagellar hook-length control protein-like, C-terminal domain.
  
     0.605
AEJ62439.1
KEGG: sta:STHERM_c21410 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.585
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.