STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62392.1PFAM: Ferredoxin thioredoxin reductase catalytic beta chain; COGs: COG4802 Ferredoxin-thioredoxin reductase catalytic subunit; InterPro IPR004209; KEGG: sta:STHERM_c20920 hypothetical protein; PFAM: Ferredoxin thioredoxin reductase, beta subunit; SPTR: Ferredoxin thioredoxin reductase beta chain. (110 aa)    
Predicted Functional Partners:
AEJ62393.1
PFAM: Glutaredoxin; InterPro IPR002109; KEGG: sta:STHERM_c20930 hypothetical protein; PFAM: Glutaredoxin; SPTR: Glutaredoxin.
     
 0.810
AEJ62394.1
KEGG: sta:STHERM_c20940 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.651
AEJ60942.1
PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: sta:STHERM_c06480 glutamate synthase-related protein; PFAM: Glutamate synthase, central-C; SPTR: Glutamate synthase (NADPH) GltB2 subunit.
  
   
 0.501
AEJ61471.1
KEGG: sta:STHERM_c11660 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.460
AEJ62395.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: sta:STHERM_c20950 hypothetical protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; SPTR: Putative uncharacterized protein.
       0.443
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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