STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ62487.1PFAM: Ferritin-like domain; COGs: COG2406 Protein distantly related to ferritins; InterPro IPR008331; KEGG: sta:STHERM_c21860 hypothetical protein; PFAM: Ferritin/Dps protein; SPTR: Putative uncharacterized protein. (170 aa)    
Predicted Functional Partners:
AEJ62488.1
Hypothetical protein; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; COGs: COG1692 conserved hypothetical protein; KEGG: ssm:Spirs_4037 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.535
AEJ62319.1
Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; InterPro IPR006683:IPR003736; KEGG: sta:STHERM_c20120 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein.
  
     0.522
Your Current Organism:
Spirochaeta thermophila
NCBI taxonomy Id: 869211
Other names: S. thermophila DSM 6578, Spirochaeta thermophila DSM 6578, Spirochaeta thermophila str. DSM 6578, Spirochaeta thermophila strain DSM 6578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.