STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM10722.1Integrase catalytic region; PFAM: Integrase core domain; COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: abc:ACICU_02563 IS30 family transposase; PFAM: Integrase, catalytic core; SPTR: Transposase of ISCARN114, IS30 family. (321 aa)    
Predicted Functional Partners:
AFM10718.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: xca:xccb100_3278 type I site-specific deoxyribonuclease (specificity subunit); PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative restriction endonuclease S subunits.
       0.533
AFM10721.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: mfa:Mfla_2604 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: N-6 DNA methylase.
       0.531
AFM10719.1
PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: plm:Plim_3524 Abi family protein; PFAM: Abortive infection bacteriophage resistance related; SPTR: AbiD phage protein-like protein.
       0.529
AFM10720.1
Hypothetical protein.
       0.529
AFM10723.1
Hypothetical protein.
       0.528
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.