STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM10789.1PFAM: Transcriptional Coactivator p15 (PC4); InterPro IPR003173; KEGG: lil:LA_4329 transcriptional coactivator-like protein; PFAM: Transcriptional coactivator p15; SPTR: Transcriptional coactivator-like protein. (74 aa)    
Predicted Functional Partners:
AFM14552.1
InterPro IPR006597:IPR019734; KEGG: tet:TTHERM_01156780 SLEI family protein; PFAM: Sel1-like; SPTR: SLEI family protein.
  
     0.715
AFM14633.1
COGs: COG2912 conserved hypothetical protein; KEGG: nde:NIDE0521 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.636
AFM10788.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ade:Adeh_1256 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain (CNMP-BD) protein.
       0.570
AFM10790.1
Hypothetical protein.
       0.551
AFM10791.1
Histidine triad (HIT) protein; PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: gme:Gmet_1225 histidine triad (HIT) protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein.
       0.551
AFM10792.1
KEGG: lbf:LBF_1598 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.551
AFM11728.1
PFAM: Protein of unknown function (DUF1625); InterPro IPR012430; KEGG: mlo:mll2895 hypothetical protein; PFAM: Protein of unknown function DUF1625; SPTR: Mll2895 protein.
  
     0.530
AFM13912.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: npu:Npun_R6026 tetratricopeptide TPR_4; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_4.
  
     0.500
AFM11711.1
PFAM: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro IPR019547; KEGG: lic:LIC12673 hypothetical protein; PFAM: Kua-ubiquitin conjugating enzyme hybrid, localisation; SPTR: Putative uncharacterized protein.
  
     0.498
AFM14302.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006091:IPR006090; KEGG: lbf:LBF_0217 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase.
  
     0.470
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.