STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM10932.1PFAM: Protein of unknown function (DUF465); KEGG: meh:M301_0609 hypothetical protein; SPTR: Putative uncharacterized protein. (80 aa)    
Predicted Functional Partners:
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
 
    0.966
AFM10766.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: azo:azo2831 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR: Putative uncharacterized protein; TIGRFAM: polyphosphate:AMP phosphotransferase.
  
    0.796
AFM10933.1
TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: mtt:Ftrac_3249 succinate dehydrogenase subunit C; SPTR: Succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit.
       0.723
AFM14639.1
PFAM: Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR013704:IPR007197; KEGG: lby:Lbys_1966 radical sam domain protein; PFAM: Radical SAM N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM.
   
    0.618
AFM10930.1
23S rRNA m(5)U-1939 methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: ppd:Ppro_1783 RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: 23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.540
AFM10931.1
COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; InterPro IPR000073; KEGG: nit:NAL212_1825 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.
       0.540
AFM14655.1
Oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR004558:IPR006638:IPR007197:IPR010723; KEGG: pmx:PERMA_1329 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; Belongs to the anaerobic copr [...]
  
    0.529
AFM10934.1
PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: chu:CHU_2473 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Possible succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gr [...]
       0.491
AFM12742.1
PFAM: NnrS protein; COGs: COG3213 Uncharacterized protein involved in response to NO; InterPro IPR010266; KEGG: lbf:LBF_2851 nitric oxide response protein; PFAM: NnrS; SPTR: Putative heme-Cu protein NnrS (Nos operon region); putative membrane protein.
  
     0.487
AFM11003.1
PFAM: Protein of unknown function (DUF692); Uncharacterized protein conserved in bacteria (DUF2063); COGs: COG3220 conserved hypothetical protein; InterPro IPR007801; KEGG: pfs:PFLU6099 hypothetical protein; PFAM: Protein of unknown function DUF692; SPTR: UPF0276 protein PFLU_6099; manually curated.
  
     0.460
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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