STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11144.1KEGG: llo:LLO_3002 transmembrane protein (fibronectin III domain and GP5 C-terminal repeat); SPTR: Putative transmembrane protein (Fibronectin III domain and Gp5 C-terminal repeat). (1055 aa)    
Predicted Functional Partners:
AFM11142.1
Hypothetical protein.
       0.768
AFM11143.1
Hypothetical protein.
       0.768
AFM10904.1
PFAM: FG-GAP repeat; InterPro IPR013519:IPR013517; KEGG: lil:LA_1499 cytoplasmic membrane protein; PFAM: FG-GAP; SMART: Integrin alpha beta-propellor; SPTR: Cytoplasmic membrane protein.
  
     0.437
AFM12686.1
PFAM: Cytidylyltransferase family; COGs: COG0170 Dolichol kinase; InterPro IPR000374; KEGG: lbf:LBF_1660 dolichol kinase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Putative uncharacterized protein.
  
     0.416
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.