STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11316.1PFAM: Alg9-like mannosyltransferase family; InterPro IPR005599; KEGG: Alg9 family protein mannosyltransferase; PFAM: Alg9-like mannosyltransferase; SPTR: Alg9 family protein mannosyltransferase. (499 aa)    
Predicted Functional Partners:
AFM11315.1
PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; InterPro IPR010743; KEGG: sat:SYN_01259 methyltransferase; PFAM: Methionine biosynthesis MetW; SPTR: Methyltransferase; TIGRFAM: Methionine biosynthesis MetW.
       0.737
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
       0.702
AFM11312.1
Hypothetical protein.
       0.580
AFM11313.1
Hypothetical protein.
       0.580
AFM11317.1
KEGG: lbf:LBF_1523 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.533
AFM11318.1
PFAM: Restriction endonuclease; InterPro IPR001440:IPR007560:IPR019734; KEGG: ssm:Spirs_2364 restriction endonuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; Tetratricopeptide TPR-1; SPTR: Restriction endonuclease.
       0.533
AFM11319.1
Hypothetical protein.
       0.533
AFM11320.1
Hypothetical protein.
       0.533
AFM11311.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: lic:LIC12937 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
       0.425
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.