STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11343.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
AFM11344.1
PFAM: Protein of unknown function (DUF461); COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: cps:CPS_4755 hypothetical protein; PFAM: DR1885-like metal-binding protein; SPTR: Putative uncharacterized protein.
       0.559
AFM11345.1
PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: mea:Mex_1p3435 electron transport protein SenC-related; PFAM: Copper chaperone SCO1/SenC; SPTR: Electron transport protein SenC-related.
       0.559
AFM11346.1
NifU family SUF system FeS assembly protein; PFAM: NifU-like N terminal domain; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: art:Arth_1236 NifU family SUF system FeS assembly protein; SPTR: SUF system FeS assembly protein.
       0.559
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.