STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11360.1Hypothetical protein; PFAM: FeoA domain; KEGG: dra:DR_1220 ferrous iron transport protein A; SPTR: Ferrous iron transport protein A. (82 aa)    
Predicted Functional Partners:
AFM11359.1
PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917:IPR011619:IPR011642:IPR011640:IPR003373; KEGG: caa:Caka_2817 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B.
  
  
 0.987
AFM11358.1
PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: bpu:BPUM_0153 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: YbbC.
       0.423
AFM11361.1
PemK family protein; Toxic component of a type II toxin-antitoxin (TA) system.
       0.410
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
   
    0.404
AFM11362.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
       0.402
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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