STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11361.1PemK family protein; Toxic component of a type II toxin-antitoxin (TA) system. (113 aa)    
Predicted Functional Partners:
AFM11362.1
KEGG: hypothetical protein; SPTR: Putative uncharacterized protein.
       0.765
AFM12665.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
     0.619
AFM13987.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: lbl:LBL_2675 proteic killer gene system protein, growth inhibitor; PFAM: PemK-like protein; SPTR: Proteic killer gene system protein, growth inhibitor.
  
     0.619
AFM11329.1
PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, MarR family.
   
    0.441
AFM11363.1
PFAM: Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680; KEGG: hypothetical protein; PFAM: Amidohydrolase 1; SPTR: N-acyl-D-glutamate amidohydrolase.
       0.427
AFM11359.1
PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; COGs: COG0370 Fe2+ transport system protein B; InterPro IPR002917:IPR011619:IPR011642:IPR011640:IPR003373; KEGG: caa:Caka_2817 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B.
       0.410
AFM11360.1
Hypothetical protein; PFAM: FeoA domain; KEGG: dra:DR_1220 ferrous iron transport protein A; SPTR: Ferrous iron transport protein A.
       0.410
AFM11645.1
Addiction module antidote; PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote; InterPro IPR013432:IPR007159; KEGG: sru:SRU_2815 putative addiction module antidote; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator/antitoxin, MazE; TIGRFAM: Putative addiction module antidote.
  
 
 0.410
AFM12666.1
SpoVT/AbrB domain-containing protein; PFAM: SpoVT / AbrB like domain; InterPro IPR007159; KEGG: lbl:LBL_2676 proteic killer gene system protein, suppressor of inhibitory function of MazF; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Proteic killer gene system protein, suppressor of inhibitory function of MazF.
  
 
 0.410
AFM13988.1
Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT / AbrB like domain; InterPro IPR007159; KEGG: lbl:LBL_2676 proteic killer gene system protein, suppressor of inhibitory function of MazF; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Proteic killer gene system protein, suppressor of inhibitory function of MazF.
  
 
 0.410
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.