STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11371.1Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: kol:Kole_0692 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component. (310 aa)    
Predicted Functional Partners:
AFM11372.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: lsg:lse_0157 sugar ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter, permease protein.
 
 0.999
AFM11368.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: rmr:Rmar_0365 ABC transporter-like protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 
 0.998
AFM11373.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tbo:Thebr_0268 family 1 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Putative maltose-binding protein.
 
 
 0.997
AFM11386.1
Glycoside hydrolase family 77; PFAM: 4-alpha-glucanotransferase; Alpha amylase, catalytic domain; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR006047:IPR003385:IPR006589; KEGG: mrb:Mrub_1831 alpha amylase catalytic subunit; PFAM: Glycoside hydrolase, family 77; Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region.
  
  
 0.816
AFM11369.1
Hypothetical protein.
       0.773
AFM11370.1
PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: npu:Npun_F0835 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.
       0.773
AFM11778.1
PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: msv:Mesil_0835 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Alpha amylase catalytic region; manually curated.
 
  
 0.658
AFM11374.1
KEGG: slt:Slit_2186 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.556
AFM11375.1
PFAM: Protein of unknown function (DUF3532); KEGG: slt:Slit_2187 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.556
AFM11379.1
PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; InterPro IPR013534:IPR001296; KEGG: son:SO_1499 glycogen synthase; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; SPTR: Starch (Glycogen) synthase.
  
    0.527
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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