STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11454.1OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: ssm:Spirs_2081 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein. (902 aa)    
Predicted Functional Partners:
AFM14454.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: Peptidoglycan-associated lipoprotein.
 
 
 0.746
AFM12434.1
OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: lic:LIC20250 peptidoglycan-associated cytoplasmic membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA-family protein.
  
     0.735
AFM14729.1
OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: chu:CHU_1561 OmpA family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein, OmpA family.
  
     0.733
AFM13913.1
P83100 family protein; PFAM: Borrelia P83/100 protein; InterPro IPR007926; KEGG: lil:LA_0365 hypothetical protein; PFAM: Borrelia P83100; SPTR: Putative uncharacterized protein.
 
  
 0.728
AFM10917.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: lil:LA_0056 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein.
 
 
 0.715
AFM11090.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR019734; KEGG: lbf:LBF_1109 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; Tetratricopeptide repeat; SPTR: Putative cAMP binding protein.
 
  
 0.691
AFM12474.1
OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: lil:LA_0056 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein.
 
 
 0.677
AFM13345.1
OmpA/MotB domain protein; PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: lic:LIC10592 peptidoglycan-associated cytoplasmic membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Peptidoglycan-associated cytoplasmic membrane protein.
  
 
 0.644
AFM11318.1
PFAM: Restriction endonuclease; InterPro IPR001440:IPR007560:IPR019734; KEGG: ssm:Spirs_2364 restriction endonuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; Tetratricopeptide TPR-1; SPTR: Restriction endonuclease.
  
     0.633
AFM11227.1
Hypothetical protein; PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR011659; KEGG: rmr:Rmar_1730 WD40 domain-containing protein beta propeller; SPTR: WD40 domain protein beta Propeller.
  
 
 0.587
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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