STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11563.1PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: dba:Dbac_2664 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE. (467 aa)    
Predicted Functional Partners:
AFM11564.1
KEGG: bhl:Bache_1853 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.718
AFM12549.1
Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: dol:Dole_1413 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 superfamily.
   
 
 0.716
AFM10767.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde- [...]
  
  
 0.647
AFM13353.1
SSU ribosomal protein S1P; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: lbf:LBF_2515 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA binding domain; SPTR: 30S ribosomal protein S1.
  
    0.613
AFM11560.1
GTP-binding signal recognition particle SRP54 G- domain-containing protein; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: lbf:LBF_0910 flagellar biosynthesis regulator FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellar biosynthesis protein FlhF (Flagella associated GTP-binding protein).
       0.565
AFM11561.1
Type III secretion FHIPEP protein; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR001712; KEGG: lbl:LBL_1842 endoflagellar biosynthesis protein; PFAM: Type III secretion system FHIPEP; SPTR: Endoflagellar biosynthesis protein.
       0.565
AFM11562.1
Type III secretion exporter; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB; COGs: COG1377 Flagellar biosynthesis pathway component FlhB; InterPro IPR006135; KEGG: sta:STHERM_c09290 hypothetical protein; PFAM: Type III secretion exporter; SPTR: Flagellar biosynthetic protein FlhB.
       0.565
AFM11559.1
Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: lil:LA_2605 ParA protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: ParA protein.
       0.550
AFM11565.1
Sigma E regulatory protein, MucB/RseB; KEGG: ttu:TERTU_1996 hypothetical protein; SPTR: Hyopothetical protein.
       0.524
AFM11566.1
Hypothetical protein; PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: ttu:TERTU_1995 hypothetical protein; SPTR: Exporters of the RND superfamily-like protein.
       0.524
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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