STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11635.1Hypothetical protein; PFAM: Curli production assembly/transport component CsgG; KEGG: cyb:CYB_0517 CsgG family protein; SPTR: CsgG family protein. (173 aa)    
Predicted Functional Partners:
AFM11634.1
KEGG: dra:DR_1735 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFM11996.1
PFAM: Protein of unknown function, DUF400; KEGG: dol:Dole_1197 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.597
AFM11631.1
Hypothetical protein; KEGG: nhl:Nhal_2885 acetyltransferase; SPTR: Putative uncharacterized protein.
       0.561
AFM11632.1
AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: zpr:ZPR_3888 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family protein.
       0.561
AFM11633.1
PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: oca:OCAR_5667 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
       0.561
AFM13723.1
PFAM: PEGA domain; Curli production assembly/transport component CsgG; InterPro IPR013229; KEGG: tga:TGAM_0690 amylopullulanase, putative (Apu); PFAM: PEGA; SPTR: Amylopullulanase, putative (Apu).
 
   
 0.426
AFM11227.1
Hypothetical protein; PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR011659; KEGG: rmr:Rmar_1730 WD40 domain-containing protein beta propeller; SPTR: WD40 domain protein beta Propeller.
 
    0.418
AFM11630.1
Asparaginase/glutaminase; PFAM: Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: rcu:RCOM_2021760 l-asparaginase, putative; PFAM: Asparaginase/glutaminase; SPTR: L-asparaginase, putative.
       0.412
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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