STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11642.1KEGG: lbf:LBF_1170 hypothetical protein; SPTR: Putative uncharacterized protein. (563 aa)    
Predicted Functional Partners:
AFM11640.1
PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: zpr:ZPR_4697 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Putative uncharacterized protein.
       0.532
AFM11641.1
KEGG: shm:Shewmr7_0521 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.532
AFM13014.1
KEGG: lbf:LBF_4215 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.523
AFM11249.1
Hypothetical protein; TIGRFAM: AZL_007920/MXAN_0976 family protein; KEGG: sur:STAUR_0415 hypothetical protein; SPTR: Lipoprotein.
  
     0.518
AFM12428.1
KEGG: mxa:MXAN_6790 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.507
AFM13171.1
KEGG: hoh:Hoch_2450 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.482
AFM14327.1
KEGG: cme:CMN018C hypothetical protein, conserved; SPTR: Putative uncharacterized protein.
  
     0.456
AFM13102.1
methylmalonyl-CoA epimerase; KEGG: lbf:LBF_1438 hypothetical protein; SPTR: Putative lactoylglutathione lyase.
  
     0.443
AFM13143.1
PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: lbf:LBF_2912 TonB dependent receptor; PFAM: TonB-dependent receptor, plug; SPTR: TonB dependent receptor.
  
     0.423
AFM12323.1
Hypothetical protein; InterPro IPR013519; KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.422
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.