STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11675.1Hypothetical protein. (369 aa)    
Predicted Functional Partners:
AFM11676.1
KEGG: lbf:LBF_2446 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.642
AFM11674.1
Hypothetical protein; InterPro IPR013519; KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.613
AFM11677.1
PFAM: HEPN domain; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: lbl:LBL_0575 hypothetical protein; PFAM: HEPN; SMART: HEPN; SPTR: Putative uncharacterized protein.
       0.529
AFM11678.1
DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; InterPro IPR002934; KEGG: lbl:LBL_0576 hypothetical protein; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein.
       0.529
AFM11679.1
PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: pvi:Cvib_1650 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Uncharacterized conserved protein UCP016719.
       0.529
AFM11673.1
Hypothetical protein; PFAM: Mu transposase, C-terminal; Protein of unknown function (DUF3592); KEGG: lbi:LEPBI_I1239 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.428
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.