STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11685.1PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: nda:Ndas_1825 SSS sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (482 aa)    
Predicted Functional Partners:
AFM11358.1
PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: bpu:BPUM_0153 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: YbbC.
     0.899
AFM11679.1
PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: pvi:Cvib_1650 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Uncharacterized conserved protein UCP016719.
     0.811
AFM11686.1
Hypothetical protein; PFAM: Putative transposase; KEGG: lbf:LBF_0426 transposase; SPTR: Putative uncharacterized protein; manually curated.
  
 
 0.537
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.513
AFM11684.1
PFAM: Pyridoxamine 5'-phosphate oxidase; KEGG: pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein.
       0.509
AFM11053.1
PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: sus:Acid_5232 Na+ dependent nucleoside transporter; PFAM: Na dependent nucleoside transporter, C-terminal; Nucleoside recognition; Na dependent nucleoside transporter; SPTR: Na+ dependent nucleoside transporter domain protein.
  
  
 0.476
AFM13464.1
Gamma-glutamyltransferase 1; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: aeh:Mlg_2514 gamma-glutamyltransferase 1; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltransferase 1.
 
  
 0.466
AFM11794.1
PAS/PAC sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR000014:IPR001789:IPR001610:IPR003661:IPR003594:IPR0136 55; KEGG: sus:Acid_4959 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgr [...]
  
  
 0.450
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.448
AFM13677.1
AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: kko:Kkor_1563 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: AMP-dependent synthetase and ligase.
  
  
 0.448
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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