STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11693.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
AFM11691.1
PFAM: MGS-like domain; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607; KEGG: pmz:HMPREF0659_A5414 MGS-like domain protein; PFAM: MGS-like; SPTR: Bifunctional purine biosynthesis protein PurH.
       0.655
AFM11692.1
HAD superfamily (subfamily IA) hydrolase, TIGR02254; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR005834; KEGG: cby:CLM_1123 HAD superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD superfamily (Subfamily IA) hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB.
       0.655
AFM11694.1
PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013656; KEGG: lbl:LBL_1852 hypothetical protein; PFAM: PAS fold-4; SMART: PAS; SPTR: Putative uncharacterized protein; TIGRFAM: PAS.
       0.439
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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