STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11702.1PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: peptide-methionine (R)-S-oxide reductase; PFAM: Methionine sulphoxide reductase B; SPTR: Peptide-methionine (R)-S-oxide reductase. (120 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.990
msrA-2
Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.978
AFM13413.1
PFAM: Thioredoxin; Cytochrome C biogenesis protein transmembrane region; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834:IPR013766; KEGG: sur:STAUR_5811 thiol:disulfide interchange protein DsbD; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain; SPTR: Thiol:disulfide interchange protein DsbD.
   
 
 0.753
AFM11700.1
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: lbl:LBL_2858 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase (Superfamily II); manually curated; Belongs to the DEAD box helicase family.
       0.660
AFM12093.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; PDZ domain (Also known as DHR or GLGF); COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR000866; KEGG: fsu:Fisuc_0103 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: PDZ/thioredoxin domain protein.
  
 0.594
AFM11703.1
KEGG: cao:Celal_2317 short-chain dehydrogenase; SPTR: Short chain dehydrogenase.
  
    0.558
AFM11699.1
Hypothetical protein; KEGG: cpi:Cpin_2014 outer membrane insertion C-terminal signal; SPTR: Outer membrane insertion C-terminal signal.
       0.534
AFM11198.1
PFAM: Redoxin; InterPro IPR000866; KEGG: cps:CPS_2557 putative heme-binding protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative heme-binding protein.
   
 0.495
AFM12385.1
PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: gfo:GFO_2503 thiol-disulfide oxidoreductase; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin family protein.
   
 0.495
AFM13357.1
PFAM: Redoxin; InterPro IPR000866; KEGG: tmr:Tmar_1577 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin.
   
 0.495
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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