STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM11885.1Protein of unknown function DUF2191; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); InterPro IPR019239; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2191; SPTR: Putative uncharacterized protein. (67 aa)    
Predicted Functional Partners:
AFM11884.1
PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: ttm:Tthe_2671 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.
 
   0.963
vapC-4
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.838
AFM11883.1
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: lbf:LBF_1336 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein.
       0.773
vapC-11
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   0.692
AFM11886.1
KEGG: dol:Dole_0953 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.541
AFM11939.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG5573 nucleic-acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: swo:Swol_1570 PilT-like protein; PFAM: PilT protein, N-terminal; SPTR: PilT-like protein.
  
     0.408
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.