STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12244.1PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: smt:Smal_1683 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; manually curated. (147 aa)    
Predicted Functional Partners:
AFM12245.1
InterPro IPR001845; KEGG: mci:Mesci_0727 ArsR family transcription regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR.
    0.993
AFM12243.1
PFAM: Glutathione-dependent formaldehyde-activating enzyme; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mci:Mesci_0729 glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating, GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA.
       0.814
AFM12246.1
Homospermidine synthase; PFAM: Saccharopine dehydrogenase; COGs: COG5310 Homospermidine synthase; InterPro IPR009442; KEGG: mma:MM_0166 homospermidine synthase; SPTR: Homospermidine synthase.
       0.531
AFM12247.1
Nuclear protein SET; PFAM: SET domain; InterPro IPR001214; KEGG: ngr:NAEGRDRAFT_78553 hypothetical protein; PFAM: SET; SMART: SET; SPTR: Putative uncharacterized protein.
       0.403
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.