STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12311.1Hypothetical protein; KEGG: mgm:Mmc1_1094 putative outer membrane adhesin like proteiin; SPTR: PKD domain containing protein. (533 aa)    
Predicted Functional Partners:
AFM12312.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: chu:CHU_2541 protease; PFAM: Abortive infection protein; SPTR: Protease.
       0.538
AFM12313.1
KEGG: aau:AAur_4025 putative integral membrane protein; SPTR: Putative integral membrane protein.
       0.538
AFM12314.1
PFAM: Acyltransferase family; COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: mes:Meso_0485 acyltransferase 3; PFAM: Acyltransferase 3; SPTR: Acyltransferase 3.
       0.517
AFM12315.1
PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_00846 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase.
       0.506
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.