STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12371.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
AFM12370.1
InterPro IPR004360; KEGG: fre:Franean1_4341 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.773
AFM12368.1
KEGG: nhl:Nhal_1268 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.472
AFM12369.1
PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: sku:Sulku_0534 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Protein containing DUF497.
       0.472
AFM12372.1
PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: aex:Astex_2519 pirin domain protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin domain protein; Belongs to the pirin family.
       0.463
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.