STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12503.1COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: lbf:LBF_1268 metal-dependent hydrolase; SPTR: Putative metal-dependent hydrolase of the beta-lactamase superfamily I. (323 aa)    
Predicted Functional Partners:
AFM12500.1
FolC bifunctional protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: ace:Acel_0742 FolC bifunctional protein; PFAM: Mur ligase, central; SPTR: FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase.
       0.777
AFM12498.1
Hypothetical protein.
       0.773
AFM12499.1
KEGG: lic:LIC10406 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFM12501.1
Hypothetical protein.
       0.773
AFM12502.1
KEGG: ssm:Spirs_1498 protein serine/threonine phosphatase; SPTR: Protein serine/threonine phosphatase.
       0.773
AFM12504.1
Multiple antibiotic resistance (MarC)-related protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: sat:SYN_01458 MarC family integral membrane protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: MarC family integral membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related.
       0.560
AFM12659.1
Metal dependent phosphohydrolase; PFAM: GAF domain; COGs: COG2206 HD-GYP domain; InterPro IPR003018:IPR003607; KEGG: lbi:LEPBI_I1194 hypothetical protein; PFAM: GAF; SMART: GAF; Metal-dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein.
 
     0.554
AFM12505.1
Dehydrogenase; PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: lbl:LBL_1510 dehydrogenase; SPTR: Dehydrogenase.
       0.524
AFM13414.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; 7TM diverse intracellular signalling; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR011623:IPR001054; KEGG: lil:LB_118 adenylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Diverse 7TM receptor, transmembrane region; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase.
 
     0.481
AFM11763.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; 7TM diverse intracellular signalling; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR006104; KEGG: ter:Tery_2857 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Glycoside hydrolase family 2, carbohydrate-binding; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase.
 
     0.471
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.