STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12526.1NHL repeat containing protein; InterPro IPR001258; KEGG: sur:STAUR_1411 hypothetical protein; PFAM: NHL repeat; SPTR: NHL repeat. (664 aa)    
Predicted Functional Partners:
AFM11743.1
PFAM: NHL repeat; InterPro IPR001258; KEGG: ngr:NAEGRDRAFT_82333 hypothetical protein; PFAM: NHL repeat; SPTR: Predicted protein.
  
     0.654
AFM12839.1
PFAM: Pentaxin family; Fibronectin type III domain; InterPro IPR003961:IPR001258; KEGG: lbf:LBF_2981 hypothetical protein; PFAM: Fibronectin, type III; NHL repeat; SMART: Fibronectin, type III; SPTR: Putative uncharacterized protein.
  
     0.616
AFM12527.1
Flagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444:IPR010930:IPR020013; KEGG: lbl:LBL_1819 endoflagellar distal basal body rod protein; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; SPTR: Endoflagellar distal basal body rod protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G.
       0.522
AFM11267.1
Alpha-2-macroglobulin domain protein 2; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890:IPR011625:IPR019565; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like; PFAM: Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, thiol-ester bond-forming; SPTR: Alpha-2-macroglobulin-like protein.
  
     0.467
AFM13813.1
Alpha-2-macroglobulin domain protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890:IPR011625:IPR001599:IPR019565; KEGG: sus:Acid_2300 alpha-2-macroglobulin domain-containing protein; PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin; Alpha-2-macroglobulin, thiol-ester bond-forming; SPTR: Alpha-2-macroglobulin domain protein.
  
     0.448
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.