STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12554.1KEGG: lbl:LBL_0564 hypothetical protein; SPTR: Putative uncharacterized protein. (225 aa)    
Predicted Functional Partners:
AFM12553.1
KEGG: sur:STAUR_6734 hypothetical protein; SPTR: Conserved uncharacterized protein.
       0.773
AFM12552.1
Hypothetical protein.
       0.678
AFM12555.1
Protein of unknown function DUF374; COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: aar:Acear_2187 hypothetical protein; PFAM: Protein of unknown function DUF374; SPTR: Putative uncharacterized protein.
       0.547
AFM12292.1
Metal dependent phosphohydrolase; PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG1639 signal transduction protein; InterPro IPR003607:IPR013976:IPR006675; KEGG: lbf:LBF_2346 signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG.
 
      0.426
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.