STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12598.1Hypothetical protein; PFAM: Acyltransferase family; KEGG: ctc:CTC00459 hypothetical protein; SPTR: Conserved membrane protein. (363 aa)    
Predicted Functional Partners:
AFM11293.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.
  
     0.598
AFM13061.1
PFAM: Fibronectin type III domain; Papain family cysteine protease; COGs: COG4870 Cysteine protease; InterPro IPR000668:IPR003961; KEGG: lbf:LBF_3081 cysteine protease; PFAM: Fibronectin, type III; Peptidase C1A, papain C-terminal; SMART: Fibronectin, type III; Peptidase C1A, papain C-terminal; SPTR: Putative cysteine protease; putative signal peptide.
 
     0.584
AFM12845.1
Dual specificity protein phosphatase; PFAM: Cyclin-dependent kinase inhibitor 3 (CDKN3); Isochorismatase family; Phosphotransferase enzyme family; COGs: COG2453 protein-tyrosine phosphatase; InterPro IPR008425; KEGG: lbf:LBF_0535 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.575
AFM12713.1
PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR011623:IPR010822; KEGG: lbl:LBL_2835 TPR repeat-containing protein; PFAM: Sporulation stage II, protein E C-terminal; Diverse 7TM receptor, transmembrane region; SMART: Protein phosphatase 2C-related; SPTR: TPR-repeat-containing protein.
  
     0.574
AFM12484.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.
  
     0.568
AFM12599.1
Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: hma:rrnAC1954 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: NAD dependent epimerase/dehydratase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.562
AFM11587.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR001932:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; Protein phosphatase 2C-related; SPTR: Putative histidine kinase sensor protein; putative membrane protein.
  
     0.559
AFM12951.1
Protein serine/threonine phosphatase with extracellular sensor; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR010822:IPR001932; KEGG: lbf:LBF_3131 serine phosphatase RsbU; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; Protein phosphatase 2C-related; SPTR: Putative chemotaxis sensory transducer; putative membrane protein.
  
     0.509
AFM14679.1
Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dal:Dalk_4072 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein.
 
    0.499
AFM11149.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822:IPR001440; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; Tetratricopeptide TPR-1; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.
 
     0.475
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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