STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12704.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: lbf:LBF_0540 OMA87-like protein; PFAM: Bacterial surface antigen (D15); SPTR: Putative uncharacterized protein. (497 aa)    
Predicted Functional Partners:
AFM13571.1
PFAM: Tetratricopeptide repeat; COGs: COG1729 conserved hypothetical protein; InterPro IPR001440:IPR013105:IPR011717:IPR019734; KEGG: sru:SRU_1584 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; Tetratricopeptide TPR-4; SPTR: Tetratricopeptide repeat family.
  
 
 0.766
AFM13244.1
KEGG: lbf:LBF_2930 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 
 0.752
AFM14600.1
Alpha/beta hydrolase fold containing protein; InterPro IPR000073; KEGG: lbf:LBF_3187 hydrolase or acyltransferase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.
  
     0.738
AFM11167.1
Diguanylate phosphodiesterase; PFAM: EAL domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: lic:LIC20198 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SPTR: Putative uncharacterized protein.
  
     0.721
AFM11902.1
KEGG: lbf:LBF_0648 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.706
AFM12713.1
PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR011623:IPR010822; KEGG: lbl:LBL_2835 TPR repeat-containing protein; PFAM: Sporulation stage II, protein E C-terminal; Diverse 7TM receptor, transmembrane region; SMART: Protein phosphatase 2C-related; SPTR: TPR-repeat-containing protein.
  
     0.679
AFM13922.1
KEGG: lbl:LBL_2534 hydrolase or acyltransferase; SPTR: Hydrolase or acyltransferase.
  
 
   0.675
AFM14716.1
KEGG: lil:LA_3075 LigB-like protein; SPTR: LigC.
  
     0.650
AFM14322.1
Peptidase C14 caspase catalytic subunit p20; PFAM: Caspase domain; InterPro IPR011600; KEGG: lil:LA_4240 polysaccharide deacetylase; PFAM: Peptidase C14, caspase catalytic; SPTR: Polysaccharide deacetylase.
  
     0.643
AFM12484.1
PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); InterPro IPR003660:IPR010822; KEGG: lbf:LBF_1801 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: HAMP linker domain; SPTR: Putative histidine kinase sensor protein; putative membrane protein.
  
     0.594
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.