STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12716.1Metalloprotease; KEGG: tye:THEYE_A0856 metalloprotease; SPTR: Putative uncharacterized protein. (338 aa)    
Predicted Functional Partners:
AFM12717.1
PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR003607:IPR011621:IPR006674:IPR006675; KEGG: lbl:LBL_1252 HD superfamily hydrolase; PFAM: Metal-dependent phosphohydrolase, 7TM intracellular region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Membrane-associated HD superfamily hydrolase; TIGRFAM: HDIG.
       0.773
AFM12718.1
Hypothetical protein.
       0.773
AFM12715.1
PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: bfs:BF2043 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ATP-binding cassette protein, ChvD family.
       0.718
AFM11227.1
Hypothetical protein; PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR011659; KEGG: rmr:Rmar_1730 WD40 domain-containing protein beta propeller; SPTR: WD40 domain protein beta Propeller.
 
  
 0.678
AFM11123.1
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.645
AFM11549.1
Glutamate synthase (NADH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: lbf:LBF_4066 glutamate synthase (NADH); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Glutamate synthase large chain.
  
  
 0.578
AFM12704.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: lbf:LBF_0540 OMA87-like protein; PFAM: Bacterial surface antigen (D15); SPTR: Putative uncharacterized protein.
 
  
 0.564
AFM13720.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: lbf:LBF_1583 Oma87-like outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative outer membrane protein; putative signal peptide; TIGRFAM: Outer membrane assembly protein, YaeT.
 
  
 0.564
AFM12719.1
KEGG: lic:LIC10485 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
AFM12849.1
PFAM: Cytidylyltransferase family; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: lic:LIC10855 CDP-diglyceride synthetase; PFAM: Phosphatidate cytidylyltransferase; SPTR: CDP-diglyceride synthetase.
  
    0.525
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.