STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12742.1PFAM: NnrS protein; COGs: COG3213 Uncharacterized protein involved in response to NO; InterPro IPR010266; KEGG: lbf:LBF_2851 nitric oxide response protein; PFAM: NnrS; SPTR: Putative heme-Cu protein NnrS (Nos operon region); putative membrane protein. (387 aa)    
Predicted Functional Partners:
AFM12739.1
PFAM: Copper resistance protein D; KEGG: ajs:Ajs_3166 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.786
AFM12740.1
Hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; COGs: COG2703 Hemerythrin; InterPro IPR012312:IPR012827; KEGG: sus:Acid_5914 hemerythrin-like metal-binding protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding.
       0.774
AFM12741.1
Hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; COGs: COG2703 Hemerythrin; InterPro IPR012312:IPR012827; KEGG: dak:DaAHT2_1320 hemerythrin-like metal-binding protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding.
       0.774
AFM12745.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707:IPR001117:IPR003088:IPR012746; KEGG: lbf:LBF_1028 multicopper oxidase lipoprotein; PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Cytochrome c, class I; SPTR: Copper-containing nitrite reductase (Major outer membrane protein Pan 1); TIGRFAM: Nitrite reductase, copper containing.
  
  
 0.700
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
 
   
 0.652
AFM12744.1
Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: lbf:LBF_1029 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; manually curated.
       0.641
AFM12743.1
PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fjo:Fjoh_2416 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: Electron transport protein SCO1/SenC.
       0.634
AFM12738.1
Transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ava:Ava_3187 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
     
 0.609
AFM12746.1
Transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR000595; KEGG: dpr:Despr_1126 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family.
 
   
 0.591
AFM14688.1
PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; InterPro IPR003088; KEGG: cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I.
 
  
 0.582
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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