STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12745.1Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707:IPR001117:IPR003088:IPR012746; KEGG: lbf:LBF_1028 multicopper oxidase lipoprotein; PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Cytochrome c, class I; SPTR: Copper-containing nitrite reductase (Major outer membrane protein Pan 1); TIGRFAM: Nitrite reductase, copper containing. (471 aa)    
Predicted Functional Partners:
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
  
 
 0.998
AFM12743.1
PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fjo:Fjoh_2416 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: Electron transport protein SCO1/SenC.
 
  
 0.953
AFM12744.1
Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: lbf:LBF_1029 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; manually curated.
 
     0.951
AFM13844.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006657; KEGG: bba:Bd1608 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin oxidoreductase.
  
 
 0.951
AFM13885.1
PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: lic:LIC11285 hypothetical protein; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: Dioxygenase.
     
  0.900
AFM12753.1
Cytochrome b/b6 domain-containing protein; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR001450:IPR003813; KEGG: hth:HTH_0156 cytochrome b/b6; PFAM: Cytochrome b/b6, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.895
AFM11999.1
PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: lbl:LBL_0278 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III.
  
 
 0.881
AFM11289.1
PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR006121:IPR008250:IPR005834:IPR006403:IPR006404:IPR0064 16:IPR001757; KEGG: bbe:BBR47_03740 copper-transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Copper-transporting P-type A [...]
 
  
 0.842
AFM12751.1
PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: ilo:IL0764 hypothetical protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Uncharacterized secreted protein of SCO1/SenC/PrrC family.
 
  
 0.816
AFM13034.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR013027:IPR007867; KEGG: mtt:Ftrac_1591 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glucose-methanol-choline oxidoreductase, C-terminal; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.808
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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