STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12751.1PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: ilo:IL0764 hypothetical protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Uncharacterized secreted protein of SCO1/SenC/PrrC family. (209 aa)    
Predicted Functional Partners:
AFM12748.1
Heme A synthase; PFAM: Cytochrome oxidase assembly protein; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; HAMAP: Heme A synthase; InterPro IPR003780; KEGG: nit:NAL212_1989 heme A synthase; PFAM: Cytochrome oxidase assembly; SPTR: Heme A synthase.
 
 
 0.892
AFM12753.1
Cytochrome b/b6 domain-containing protein; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR001450:IPR003813; KEGG: hth:HTH_0156 cytochrome b/b6; PFAM: Cytochrome b/b6, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
 0.817
AFM12745.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707:IPR001117:IPR003088:IPR012746; KEGG: lbf:LBF_1028 multicopper oxidase lipoprotein; PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Cytochrome c, class I; SPTR: Copper-containing nitrite reductase (Major outer membrane protein Pan 1); TIGRFAM: Nitrite reductase, copper containing.
 
  
 0.816
AFM12756.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; InterPro IPR002429; KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; SPTR: Cytochrome c oxidase subunit II.
 
 
 0.793
AFM12747.1
PFAM: DGC domain; COGs: COG4273 conserved hypothetical protein; InterPro IPR014958; KEGG: dia:Dtpsy_2576 dgc domain-containing protein; PFAM: DGC; SPTR: DGC domain protein.
       0.773
AFM12749.1
Hypothetical protein.
       0.773
AFM12750.1
Hypothetical protein.
       0.773
AFM12752.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440; PFAM: Tetratricopeptide TPR-1.
       0.773
AFM12744.1
Sulphatase-modifying factor protein; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: lbf:LBF_1029 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; manually curated.
 
   
 0.757
AFM12755.1
PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: hth:HTH_0153 heme/copper-type cytochrome/quinol oxidase subunit 1; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase subunit I.
 
  
 0.717
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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