STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12785.1PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: cpi:Cpin_5750 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Conserved domain protein. (146 aa)    
Predicted Functional Partners:
AFM12784.1
PFAM: MaoC like domain; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: app:CAP2UW1_2498 MaoC domain-containing protein dehydratase; PFAM: MaoC-like dehydratase; SPTR: MaoC domain protein dehydratase.
       0.613
AFM12370.1
InterPro IPR004360; KEGG: fre:Franean1_4341 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.468
vapC-7
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.436
AFM12783.1
KEGG: nde:NIDE0652 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.436
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.