STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12923.1PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: cyn:Cyan7425_2726 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family. (208 aa)    
Predicted Functional Partners:
AFM12919.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR003423; KEGG: dak:DaAHT2_0587 acriflavin resistance protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.589
AFM12922.1
Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: pcu:pc0826 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.550
AFM12920.1
PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: vha:VIBHAR_02853 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.
       0.542
AFM12921.1
Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR.
       0.542
AFM12431.1
Hypothetical protein; PFAM: ATP-NAD kinase; KEGG: fps:FP1085 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.419
pheS
phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188:IPR002319:IPR004529; KEGG: lbf:LBF_0490 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synt [...]
       0.416
AFM14304.1
Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: hna:Hneap_1042 phosphoesterase PA-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphoesterase, PA-phosphatase related protein.
  
     0.408
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.