STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12996.1Anti-anti-sigma regulatory factor, SpoIIAA; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: swo:Swol_1795 anti-anti-sigma regulatory factor, SpoIIAA; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (111 aa)    
Predicted Functional Partners:
AFM12997.1
Protein serine/threonine phosphatase with extracellular sensor; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR010822:IPR001932; KEGG: lbf:LBF_1690 regulator of sigma subunit; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; SMART: Protein phosphatase 2C-related; HAMP linker domain; SPTR: Putative sigma factor sigB regulation protein RsbU; putative membrane protein; putative signal peptide.
 
   0.871
AFM12995.1
Hypothetical protein.
       0.786
AFM12998.1
KEGG: lbf:LBF_1689 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFM13294.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
   0.754
AFM12578.1
KEGG: lbl:LBL_1463 serine phosphatase RsbU, regulator of sigma subunit; SPTR: Putative uncharacterized protein.
 
 
 0.670
AFM13751.1
ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: pru:PRU_2624 serine-protein kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Putative serine phosphatase RsbU.
  
 
 0.600
AFM12911.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: lic:LIC12787 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.599
AFM14662.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
   0.560
AFM10868.1
Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: lbl:LBL_0257 anti-sigma regulatory factor; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
AFM11806.1
KEGG: lic:LIC12942 hypothetical protein; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.