STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13054.1PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: spu:575700 hypothetical LOC575700; PFAM: Beta-lactamase-related; SPTR: Putative esterase. (398 aa)    
Predicted Functional Partners:
AFM12315.1
PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_00846 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase.
  
     0.607
AFM13053.1
PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR002109; KEGG: etr:ETAE_3459 glutaredoxin 3; PFAM: Glutaredoxin; SPTR: Glutaredoxin 3.
       0.594
AFM13454.1
PFAM: Fatty acid desaturase; InterPro IPR005804; KEGG: psb:Psyr_2554 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.
  
     0.583
AFM13111.1
Beta-lactamase; PFAM: N-acetylmuramoyl-L-alanine amidase; Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR002502:IPR001466; KEGG: fbc:FB2170_11406 hypothetical protein; PFAM: Beta-lactamase-related; N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: Putative uncharacterized protein.
  
   
 0.555
AFM14456.1
KEGG: hoh:Hoch_3229 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.515
AFM13934.1
KEGG: hoh:Hoch_3229 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
AFM11177.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: pap:PSPA7_0916 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.
  
     0.485
AFM11472.1
FAD dependent oxidoreductase; PFAM: Flavin-binding monooxygenase-like; COGs: COG2072 flavoprotein involved in K+ transport; InterPro IPR006076; KEGG: maq:Maqu_3830 cyclohexanone monooxygenase; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase, flavin-binding family protein.
  
     0.455
AFM13872.1
Carotenoid oxygenase; PFAM: Retinal pigment epithelial membrane protein; COGs: COG3670 Lignostilbene-alpha beta-dioxygenase; InterPro IPR004294; KEGG: bra:BRADO5008 putative carotenoid oxygenase; PFAM: Carotenoid oxygenase; SPTR: Putative carotenoid oxygenase.
  
     0.431
AFM13052.1
KEGG: Maf-like protein; SPTR: Putative uncharacterized protein.
       0.426
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.