STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13067.1PFAM: Glutathione-dependent formaldehyde-activating enzyme; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: bbt:BBta_7165 hypothetical protein; PFAM: Glutathione-dependent formaldehyde-activating, GFA; SPTR: Putative uncharacterized protein. (139 aa)    
Predicted Functional Partners:
AFM12243.1
PFAM: Glutathione-dependent formaldehyde-activating enzyme; COGs: COG3791 conserved hypothetical protein; InterPro IPR006913; KEGG: mci:Mesci_0729 glutathione-dependent formaldehyde-activating GFA; PFAM: Glutathione-dependent formaldehyde-activating, GFA; SPTR: Glutathione-dependent formaldehyde-activating GFA.
  
     0.746
AFM13065.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rmr:Rmar_1363 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1.
  
    0.606
AFM13066.1
Glycosidase related protein; PFAM: Domain of unknown function (DUF377); COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: bja:bll5143 hypothetical protein; PFAM: Glycosidase, PH1107-related; SPTR: Bll5143 protein; manually curated.
       0.598
AFM13064.1
Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: ter:Tery_4650 ribulose-5-phosphate 4-epimerase and related epimerase and aldolases; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Putative uncharacterized protein.
       0.443
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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