STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13257.1Globin; PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; InterPro IPR001486; KEGG: hypothetical protein; PFAM: Globin, truncated bacterial-like; SPTR: Putative uncharacterized protein. (152 aa)    
Predicted Functional Partners:
AFM14797.1
PFAM: Late embryogenesis abundant protein; InterPro IPR013990:IPR004864; KEGG: vvi:100266227 hypothetical protein LOC100266227; PFAM: Late embryogenesis abundant protein 2; SMART: Water Stress/Hypersensitive response domain; SPTR: Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x.
  
     0.732
rimP
Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
     0.633
AFM13255.1
Hypothetical protein.
       0.550
AFM13256.1
PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: mil:ML5_5033 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase.
       0.550
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.