STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13274.1PFAM: Antibiotic biosynthesis monooxygenase; COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR007138; KEGG: mpt:Mpe_A3555 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Antibiotic biosynthesis monooxygenase domain protein. (118 aa)    
Predicted Functional Partners:
AFM13275.1
PFAM: Glycosyltransferase family 17; InterPro IPR006813; KEGG: bba:Bd1672 putative N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 17; SPTR: Putative N-acetylglucosaminyltransferase.
       0.773
AFM13276.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sus:Acid_7409 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Mannosyltransferase B.
       0.714
AFM13277.1
Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pap:PSPA7_2212 putative lipase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein.
       0.714
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.