STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13701.1Protein of unknown function DUF2147; PFAM: Uncharacterized protein conserved in bacteria (DUF2147); COGs: COG4731 conserved hypothetical protein; InterPro IPR019223; KEGG: mxa:MXAN_2208 hypothetical protein; PFAM: Protein of unknown function DUF2147; SPTR: Putative uncharacterized protein. (166 aa)    
Predicted Functional Partners:
AFM13700.1
Hypothetical protein.
       0.567
AFM13702.1
Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.524
AFM11010.1
PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR002225; KEGG: cak:Caul_3985 NAD-dependent epimerase/dehydratase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase.
 
      0.520
AFM14771.1
PFAM: Protein of unknown function (DUF1289); InterPro IPR010710; KEGG: bvi:Bcep1808_7287 hypothetical protein; PFAM: Protein of unknown function DUF1289; SPTR: Putative uncharacterized protein.
  
     0.444
AFM13698.1
PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: lbf:LBF_1423 TRAP-type C4-dicarboxylate transport system periplasmic protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: ABC-type transport system, periplasmic binding protein.
       0.433
AFM13699.1
KEGG: lbf:LBF_1424 putative lipoprotein; SPTR: Putative uncharacterized protein.
       0.433
AFM13696.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: lbf:LBF_1421 TRAP-type C4-dicarboxylate transport system large permease protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative transport system; putative membrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit.
       0.420
AFM13697.1
PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: lbf:LBF_1422 TRAP-type C4-dicarboxylate transport system small permease protein; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: ABC-type transport system, permease; putative membrane protein.
       0.420
AFM12826.1
PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: bmj:BMULJ_01324 putative redox protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Putative redox protein.
 
     0.413
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.