STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13845.1Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Class III cytochrome C family; KEGG: lbl:LBL_2279 hypothetical protein; SPTR: Putative uncharacterized protein. (188 aa)    
Predicted Functional Partners:
AFM13844.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006657; KEGG: bba:Bd1608 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin oxidoreductase.
 
 
 0.998
AFM13843.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1; PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: lic:LIC10875 molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoredutase membrane subunit.
 
 
 
 0.992
AFM13840.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2; KEGG: lbl:LBL_2274 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.988
AFM13841.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit; PFAM: Cytochrome c; KEGG: lbf:LBF_1319 hypothetical protein; SPTR: Putative cytochrome c_like protein.
 
 
 0.977
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
  
 
 0.977
AFM13842.1
PFAM: Protein of unknown function (DUF3341); KEGG: lic:LIC10876 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.976
AFM11999.1
PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: lbl:LBL_0278 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III.
 
 0.968
AFM12753.1
Cytochrome b/b6 domain-containing protein; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR001450:IPR003813; KEGG: hth:HTH_0156 cytochrome b/b6; PFAM: Cytochrome b/b6, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 0.964
AFM13846.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: lbf:LBF_2612 putative lipoprotein; PFAM: Cytochrome c, class I; SPTR: Putative cytochrome c; putative signal peptide.
 
 
 0.897
nuoD
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.864
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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