STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13846.1PFAM: Cytochrome c; InterPro IPR003088; KEGG: lbf:LBF_2612 putative lipoprotein; PFAM: Cytochrome c, class I; SPTR: Putative cytochrome c; putative signal peptide. (125 aa)    
Predicted Functional Partners:
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
 
 
 0.992
AFM13844.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006657; KEGG: bba:Bd1608 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin oxidoreductase.
 
 
 0.975
AFM13845.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Class III cytochrome C family; KEGG: lbl:LBL_2279 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.908
AFM13843.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1; PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: lic:LIC10875 molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoredutase membrane subunit.
 
 
 
 0.893
AFM12753.1
Cytochrome b/b6 domain-containing protein; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797:IPR001450:IPR003813; KEGG: hth:HTH_0156 cytochrome b/b6; PFAM: Cytochrome b/b6, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.891
AFM13840.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2; KEGG: lbl:LBL_2274 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.867
AFM11999.1
PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: lbl:LBL_0278 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III.
  
 
 0.830
AFM13841.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit; PFAM: Cytochrome c; KEGG: lbf:LBF_1319 hypothetical protein; SPTR: Putative cytochrome c_like protein.
 
     0.703
AFM12756.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; InterPro IPR002429; KEGG: app:CAP2UW1_1791 cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; SPTR: Cytochrome c oxidase subunit II.
 
 
 0.696
AFM13842.1
PFAM: Protein of unknown function (DUF3341); KEGG: lic:LIC10876 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.668
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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