STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13847.1Sulfate transporter/antisigma-factor antagonist STAS; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645; PFAM: Sulphate transporter/antisigma-factor antagonist STAS. (102 aa)    
Predicted Functional Partners:
AFM13294.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
   0.754
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
       0.541
AFM10868.1
Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: lbl:LBL_0257 anti-sigma regulatory factor; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
AFM11806.1
KEGG: lic:LIC12942 hypothetical protein; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
AFM12578.1
KEGG: lbl:LBL_1463 serine phosphatase RsbU, regulator of sigma subunit; SPTR: Putative uncharacterized protein.
  
 
 0.537
AFM13751.1
ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: pru:PRU_2624 serine-protein kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Putative serine phosphatase RsbU.
  
 
 0.537
AFM11914.1
Integral membrane sensor hybrid histidine kinase; PFAM: 7TM diverse intracellular signalling; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003661:IPR001789:IPR001932:IPR011623:IPR003594:IPR0108 22; KEGG: lbf:LBF_0920 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Div [...]
  
 
 0.513
AFM13846.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: lbf:LBF_2612 putative lipoprotein; PFAM: Cytochrome c, class I; SPTR: Putative cytochrome c; putative signal peptide.
       0.510
AFM12580.1
PFAM: FliG C-terminal domain; COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: tal:Thal_0237 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG.
  
   0.502
AFM14662.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
   0.502
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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