STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13870.1PFAM: Protein of unknown function (DUF962); COGs: COG4539 membrane protein; InterPro IPR009305; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (161 aa)    
Predicted Functional Partners:
AFM11100.1
PFAM: Protein of unknown function (DUF962); COGs: COG4323 membrane protein; InterPro IPR018722; KEGG: lbl:LBL_0658 hypothetical protein; PFAM: Protein of unknown function DUF2253, membrane; SPTR: Putative uncharacterized protein.
  
     0.710
AFM12231.1
PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: cao:Celal_2401 S1/p1 nuclease; PFAM: S1/P1 nuclease; SPTR: S1/P1 nuclease.
  
     0.592
AFM14708.1
KEGG: lil:LB_285 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.441
AFM11902.1
KEGG: lbf:LBF_0648 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.415
AFM13872.1
Carotenoid oxygenase; PFAM: Retinal pigment epithelial membrane protein; COGs: COG3670 Lignostilbene-alpha beta-dioxygenase; InterPro IPR004294; KEGG: bra:BRADO5008 putative carotenoid oxygenase; PFAM: Carotenoid oxygenase; SPTR: Putative carotenoid oxygenase.
       0.415
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.